![]() ![]() Program that compares a sequence to a database of known parallel two-stranded coiled-coils and derives a similarity score.Ĭopyright © Israel Science and Technology Directory. VADAR (Volume, Area, Dihedral Angle Reporter) is a compilation of more than 15 different algorithms and programs for analyzing and assessing peptide and protein structures from their PDB coordinate data. Structural alignment program for comparing two proteins. Interactive web service for the recognition of errors in three-dimensional structures of proteins.Ĭalculates amino acid composition, theoretical pI, molecular weight.įor a given protein sequence presents lists of peptides that would be produced using Trypsin, chymotrypsin, elastase, cyanogen bromide, iodosobenzoate etc.Ī server for the identification of signatures and signature-like patterns in protein sequences.Īn Automated Comparative Protein Modeling Server. Polymorphism Phenotyping tool that predicts possible impact of an amino acid substitution on the structure and function of a human protein. Protein Homology/analogY Recognition Engine - Protein structure prediction Protein Sequence Analysis Workbench of secondary structure prediction methods.įind and display the largest positive electrostatic patch on a protein surface. Protein Variation Effect Analyzer - A software tool which predicts whether an amino acid substitution or indel has an impact on the biological function of a protein. Protein Interface/Interface Prediction EngineĬompare protein sets for features like molecular weight, isoelectric point, enzyme classifications or structural classes. Neural network predictions of mucin type GalNAc O-glycosylation sites in mammalian proteins. Searches for all known motifs that occur in a sequence. Web-based open-source toolkit for visualisation and analysis of large-scale molecular data IUPred3 is a combined web interface that allows to identify disordered protein regions using IUPred2 and disordered binding regions using ANCHOR2. STEP 1 - Enter input sequence (s) Enter or paste a set of PROTEIN sequences in any supported format: Or, upload a file: Use a example sequence Clear sequence See more example inputs. Iterative Threading ASSEmbly Refinement is a hierarchical approach to protein structure and function prediction. Pepstats calculates statistics for your protein such as molecular weight, isoelectric point etc. GRASP-suite is a collection of tools and tutorials to perform and analyse ancestral sequence reconstruction.Ī web server for protein structure prediction, refinement, and related methods. ![]() Usage of each codon in the sequence will be plotted against the fraction of usage of the codon in the selected organism. Server for the identification of functional regions in proteins.ĭynDom is a program to determine domains, hinge axes and hinge bending residues in proteins where two conformations are available. Multiple Sequence Alignment for DNA or proteins. Online Software for Protein Sequence and Structure Analysis Online ToolĬomputed atlas of surface topography of proteins. ![]()
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